{"id":199,"date":"2012-06-04T16:14:55","date_gmt":"2012-06-04T16:14:55","guid":{"rendered":"http:\/\/evop.bioinf.uni-leipzig.de\/?page_id=199"},"modified":"2014-07-31T08:38:12","modified_gmt":"2014-07-31T08:38:12","slug":"previous-courses","status":"publish","type":"page","link":"http:\/\/evopco.bioinf.uni-leipzig.de\/?page_id=199","title":{"rendered":"Previous Courses"},"content":{"rendered":"<p>&nbsp;<\/p>\n<p><span style=\"font-family: Times New Roman,serif;\"><span style=\"font-size: xx-large;\">3rd Programming for Evolutionary Biology Course <\/span><\/span><\/p>\n<p><span style=\"font-family: Times New Roman,serif;\"><span style=\"font-size: xx-large;\">March 21st &#8211; April 6th 2014 Leipzig, Germany<\/span><\/span><\/p>\n<p>&nbsp;<\/p>\n<p><strong>Modules and Instructors<\/strong><\/p>\n<p><strong>Introduction to Linux systems<\/strong><br \/>\nGiovanni Marco Dall\u2019Olio, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Analysis of\u00a0high-throughput sequencing data<\/strong><br \/>\nDavid Langenberger, Steve Hoffmann, University of Leipzig, Germany<\/p>\n<p><strong>Analysis of RAD sequencing data and Assembly<\/strong><br \/>\nAnja Westram, University Sheffield, United Kingdom<\/p>\n<p><strong>Introduction to R<\/strong><br \/>\nKatja Nowick, University of Leipzig, Germany<\/p>\n<p><strong>Comparative analysis of expression data<\/strong><br \/>\nMehmet Somel, METU Department of Biological Sciences, Ankara, Turkey<\/p>\n<p><strong>Population genomics<\/strong><br \/>\nJohannes Engelken, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Statistics &amp; Inference<\/strong><br \/>\nStuart Baird, University of Antwerp, Belgium<\/p>\n<p><strong>Introduction to Perl<\/strong><br \/>\nSofia Robb, University of California Riverside, USA<\/p>\n<p><strong>Introduction to BioPerl<\/strong><br \/>\nSofia Robb, University of California Riverside, USA<\/p>\n<p><strong>Phylogenomics<\/strong><br \/>\nChristoph Bleidorn, University of Leipzig, Germany<\/p>\n<p><strong>Introduction to databases<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p><strong><strong>Ensembl API<\/strong><\/strong><br \/>\nBert Overduin, EMBL \u2013 European Bioinformatics Institute, Hinxton, Cambridge, UK<\/p>\n<p><strong>Visualization of scientific data<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p>&nbsp;<\/p>\n<p><strong>3 days final project<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>Invited speakers<\/strong><\/p>\n<p><strong>Structural variants in primates<\/strong><br \/>\nTomas Marques-Bonet, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>The genomics of adaptive radiation<\/strong><br \/>\nWalter Salzburger, University of Basel, Switzerland<\/p>\n<p><strong>Genomics of speciation<\/strong><br \/>\nRui Faria, University of Porto, Portugal<\/p>\n<p><strong>Epistasis and molecular evolution<\/strong><br \/>\nFyodor Kondrashov, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Evolution of non-coding RNAs<\/strong><br \/>\nPeter Stadler, University of Leipzig, Germany<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Teaching Assistants<\/strong><\/p>\n<p>Lydia Steiner, University of Leipzig, Germany<br \/>\nJan Engelhardt, University of Leipzig, Germany<br \/>\nAlvaro Perdomo-Sabogal, University of Leipzig, Germany<br \/>\nSree Rohit Raj Kolora, University of Leipzig, Germany<br \/>\nTiago Carvalho, University Pompeu Fabra, Barcelona, Spain<br \/>\nVladimir Jovanovic, University of Belgrade, Serbia<br \/>\nRik Verdonck, University of Leuven, Belgium<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Technical Support<\/strong><\/p>\n<p>Jens Steuck, University of Leipzig, Germany<br \/>\nValentina Klebanova, DITON, Regis-Breitingen, Germany<\/p>\n<p><a href=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evop2014.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-large wp-image-461\" title=\"evop2014\" src=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evop2014-1024x682.jpg\" alt=\"\" width=\"584\" height=\"388\" srcset=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evop2014-1024x682.jpg 1024w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evop2014-300x200.jpg 300w\" sizes=\"auto, (max-width: 584px) 100vw, 584px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evopmarch.jpg\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone size-medium wp-image-460\" title=\"evopmarch\" src=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evopmarch-300x200.jpg\" alt=\"\" width=\"300\" height=\"200\" srcset=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evopmarch-300x200.jpg 300w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evopmarch-1024x682.jpg 1024w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/evopmarch-449x300.jpg 449w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/p>\n<p style=\"text-align: center;\"><strong style=\"font-size: x-large;\">2nd Course: April 3<sup>rd<\/sup> &#8211; April 19<sup>th <\/sup>2013<\/strong><\/p>\n<p><strong style=\"font-size: x-large;\">Modules and Instructors<\/strong><\/p>\n<p><strong>Introduction to Linux systems<\/strong><br \/>\nGiovanni Marco Dall&#8217;Olio, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Analysis of\u00a0high-throughput sequencing data (with reference genome)<\/strong><br \/>\nSteve Hoffmann, David Langenberger, University of Leipzig, Germany<\/p>\n<p><strong>Analysis of\u00a0high-throughput sequencing data (for non-model organisms)<\/strong><br \/>\nSonja Grath, University of Munich (LMU), Germany<\/p>\n<p><strong>Introduction to R<\/strong><br \/>\nKatja Nowick, University of Leipzig, Germany<\/p>\n<p><strong>Comparative analysis of expression data<\/strong><br \/>\nMehmet Somel, University of California, Berkeley, USA<\/p>\n<p><strong>Biological graphs and networks<\/strong><br \/>\nJing Qin, University of Leipzig, Germany<\/p>\n<p><strong>Introduction to Perl<\/strong><br \/>\nSofia Robb, University of California Riverside, USA<\/p>\n<p><strong>Introduction to BioPerl<\/strong><br \/>\nSofia Robb, University of California Riverside, USA<\/p>\n<p><strong>Phylogenomics<\/strong><br \/>\nChristoph Bleidorn, University of Leipzig, Germany<\/p>\n<p><strong>Population genomics<\/strong><br \/>\nJohannes Engelken, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Introduction to databases<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p><strong>Visualization of scientific data<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p>&nbsp;<\/p>\n<p><strong>4 days final project<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong>Invited speakers<\/strong><\/p>\n<p><strong>Evolution of behavior<\/strong><br \/>\nSarah London, University of Chicago, USA<\/p>\n<p><strong>Analysis of structural variants<\/strong><br \/>\nTomas Marques-Bonet, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Genomics of speciation<\/strong><br \/>\nRui Faria, University of Porto, Portugal<\/p>\n<p><strong>Evolution of non-coding RNAs<\/strong><br \/>\nPeter Stadler, University of Leipzig, Germany<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Teaching Assistants<\/strong><\/p>\n<p>Lydia Steiner, University of Leipzig, Germany<br \/>\nJan Engelhardt, University of Leipzig, Germany<br \/>\nMiguel Fonseca, University of Vigo, Spain<br \/>\nTiago Carvalho, University Pompeu Fabra, Barcelona, Spain<br \/>\nVladimir Jovanovic, University of Belgrade, Serbia<br \/>\nRik Verdonck, University of Leuven, Belgium<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Technical Support<\/strong><\/p>\n<p>Jens Steuck, University of Leipzig, Germany<br \/>\nPetra Pregel, University of Leipzig, Germany<br \/>\nValentina Klebanova, DITON, Regis-Breitingen, Germany<\/p>\n<p><a href=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto1.png\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-327\" title=\"GroupPhoto\" src=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto1-e1385649845763.png\" alt=\"\" width=\"926\" height=\"576\" srcset=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto1-e1385649845763.png 926w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto1-e1385649845763-300x186.png 300w\" sizes=\"auto, (max-width: 926px) 100vw, 926px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/01\/Support1-e1358762142443.png\"><img loading=\"lazy\" decoding=\"async\" title=\"Support\" src=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/01\/Support1-e1358762142443.png\" alt=\"\" width=\"672\" height=\"200\" \/><\/a><\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p style=\"text-align: center;\"><strong style=\"font-size: x-large;\">1st Course: March 17<sup>th<\/sup> &#8211; April 1<sup>st <\/sup>2012<\/strong><\/p>\n<p><strong style=\"font-size: x-large;\">Modules and Instructors<\/strong><\/p>\n<p><strong>Introduction to Linux systems<\/strong><br \/>\nGiovanni Marco Dall&#8217;Olio, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Introduction to R<\/strong><br \/>\nKatja Nowick, University Leipzig, Germany<\/p>\n<p><strong>Analysis of next generation sequencing data<\/strong><br \/>\nDavid Langenberger, University Leipzig, Germany<\/p>\n<p><strong>Analysis of structural variants<\/strong><br \/>\nTomas Marques-Bonet, University Pompeu Fabra, Barcelona, Spain<\/p>\n<p><strong>Analysis of expression data<\/strong><br \/>\nKatja Nowick, University Leipzig, Germany<\/p>\n<p><strong>Promoter evolution<\/strong><br \/>\nAnnalisa Marsico, Max-Planck-Institute for Molecular Genetics, Berlin, Germany<\/p>\n<p><strong>Statistics &amp; Inference<\/strong><br \/>\nStuart Baird, University Porto, Portugal<\/p>\n<p><strong>Introduction to Perl<\/strong><br \/>\nSofia Robb, University of California Riverside, USA<\/p>\n<p><strong>Phylogenomics<\/strong><br \/>\nRasmus Nielsen, University of California, Berkeley, USA<br \/>\nRui Faria, University Porto, Portugal<\/p>\n<p><strong>Ensembl API<\/strong><br \/>\nBert Overduin, EMBL &#8211; European Bioinformatics Institute, Hinxton, Cambridge, UK<\/p>\n<p><strong>Introduction to databases<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p><strong>Visualization of scientific data<\/strong><br \/>\nJan Aerts, Leuven University, Belgium<\/p>\n<p>&nbsp;<\/p>\n<p><strong style=\"font-size: x-large;\">3 days final project<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><strong style=\"font-size: x-large;\">Invited speakers<\/strong><\/p>\n<p><strong>Evolution of behavior<\/strong><br \/>\nSarah London, University of Chicago, USA<\/p>\n<p><strong>Evolutionary ecology<\/strong><br \/>\nClaudia Acquisti, Westf\u00e4lische Wilhelms-University M\u00fcnster, Germany<\/p>\n<p><strong>Genotype to phenotype mapping<\/strong><br \/>\nBen Lehner, Centre for Genomic Regulation, Barcelona, Spain<\/p>\n<p><strong>NGS of non-model organisms<\/strong><br \/>\nMarkus Pfenninger, Biodiversity and Climate Research Center, Frankfurt, Germany<\/p>\n<p>&nbsp;<\/p>\n<p><strong style=\"font-size: x-large;\">Teaching Assistants<\/strong><\/p>\n<p>Lydia Steiner &#8211; University Leipzig, Germany<br \/>\nChristian Arnold &#8211; University Leipzig, Germany<br \/>\nRosalina Tincopa &#8211; University Leipzig, Germany<br \/>\nStefano Berto &#8211; University Leipzig, Germany<br \/>\nTiago Carvalho &#8211; University Porto, Portugal<br \/>\nMiguel Fonseca &#8211; University Porto, Portugal<br \/>\nJavier Prado &#8211; University Pompeu Fabra, Barcelona, Spain<\/p>\n<p>&nbsp;<\/p>\n<p><strong style=\"font-size: x-large;\">Technical Support<\/strong><\/p>\n<p>Jens Steuck<br \/>\nPetra Pregel<\/p>\n<p>&nbsp;<\/p>\n<p><a href=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto.png\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-200\" title=\"GroupPhoto\" src=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto.png\" alt=\"\" width=\"1080\" height=\"720\" srcset=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto.png 1080w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto-300x200.png 300w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto-1024x682.png 1024w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/GroupPhoto-450x300.png 450w\" sizes=\"auto, (max-width: 1080px) 100vw, 1080px\" \/><\/a><strong><\/strong><\/p>\n<p><a href=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/Pictures_2012Edition.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-287 aligncenter\" title=\"Pictures_2012Edition\" src=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/Pictures_2012Edition-e1357577298935.png\" alt=\"\" width=\"808\" height=\"604\" srcset=\"http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/Pictures_2012Edition-e1357577298935.png 808w, http:\/\/evopco.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/06\/Pictures_2012Edition-e1357577298935-300x224.png 300w\" sizes=\"auto, (max-width: 808px) 100vw, 808px\" \/><\/a><\/p>\n<p style=\"text-align: center;\"><strong>See more pictures on our <a title=\"Evop-Facebook\" href=\"http:\/\/www.facebook.com\/ProgrammingForEvolutionaryBiologyCourse\" target=\"_blank\">Fac<\/a><\/strong><strong><a title=\"Evop-Facebook\" href=\"http:\/\/www.facebook.com\/ProgrammingForEvolutionaryBiologyCourse\" target=\"_blank\">ebook page<\/a>!<\/strong><\/p>\n<p>&nbsp;<\/p>\n<p><a href=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/01\/VWST_rgb_1501.gif\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-138\" title=\"VWST_rgb_150\" src=\"http:\/\/evop.bioinf.uni-leipzig.de\/wp-content\/uploads\/2012\/01\/VWST_rgb_1501.gif\" alt=\"\" width=\"282\" height=\"54\" \/><\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>&nbsp; 3rd Programming for Evolutionary Biology Course March 21st &#8211; April 6th 2014 Leipzig, Germany &nbsp; Modules and Instructors Introduction to Linux systems Giovanni Marco Dall\u2019Olio, University Pompeu Fabra, Barcelona, Spain Analysis of\u00a0high-throughput sequencing data David Langenberger, Steve Hoffmann, University &hellip; <a href=\"http:\/\/evopco.bioinf.uni-leipzig.de\/?page_id=199\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"showcase.php","meta":{"footnotes":""},"class_list":["post-199","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/pages\/199","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=199"}],"version-history":[{"count":41,"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/pages\/199\/revisions"}],"predecessor-version":[{"id":467,"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=\/wp\/v2\/pages\/199\/revisions\/467"}],"wp:attachment":[{"href":"http:\/\/evopco.bioinf.uni-leipzig.de\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=199"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}